Johan L. Elf: search on Z-Library

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1

Single-Molecule Kinetics in Living Cells

Elf, Johan, Barkefors, Irmeli

Journal:

Annual Review of Biochemistry

Year:

2019

Language:

english

File:

PDF, 623 KB

english, 2019

2

Fokker–Planck approximation of the master equation in molecular biology

Paul Sjöberg, Per Lötstedt, Johan Elf

Journal:

Computing and Visualization in Science

Year:

2009

Language:

english

File:

PDF, 328 KB

english, 2009

3

Young carers as co-designers of a web-based support system – the views of two publics

Elf, Mikael, Rystedt, Hans, Lundin, Johan, Krevers, Barbro

Journal:

Informatics for Health and Social Care

Year:

2012

Language:

english

File:

PDF, 233 KB

english, 2012

4

Noise-Induced Min Phenotypes in E. coli

Fange, David, Elf, Johan

Journal:

PLoS Computational Biology

Year:

2006

Language:

english

File:

PDF, 516 KB

english, 2006

5

The Synchronization of Replication and Division Cycles in Individual E. coli Cells

Wallden, Mats, Fange, David, Lundius, Ebba Gregorsson, Baltekin, Özden, Elf, Johan

Journal:

Year:

2016

Language:

english

File:

PDF, 2.44 MB

english, 2016

6

Nanometer resolution imaging and tracking of fluorescent molecules with minimal photon fluxes

Balzarotti, Francisco, Eilers, Yvan, Gwosch, Klaus C., Gynnå, Arvid H., Westphal, Volker, Stefani, Fernando D., Elf, Johan, Hell, Stefan W.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.92 MB

english, 2017

7

Antibiotic susceptibility testing in less than 30 min using direct single-cell imaging

Baltekin, Özden, Boucharin, Alexis, Tano, Eva, Andersson, Dan I., Elf, Johan

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 1.32 MB

english, 2017

8

Bursting onto the scene? Exploring stochastic mRNA production in bacteria

Jones, Daniel, Elf, Johan

Journal:

Current Opinion in Microbiology

Year:

2018

Language:

english

File:

PDF, 573 KB

english, 2018

9

The diagnostic performance of APC–PCI complex determination compared tod-dimer in the diagnosis of deep vein thrombosis

Johan L. Elf, Karin Strandberg, Peter J. Svensson

Journal:

Journal of Thrombosis and Thrombolysis

Year:

2010

Language:

english

File:

PDF, 194 KB

english, 2010

10

Studying transcriptional interactions in single cells at sufficient resolution

Mats Wallden, Johan Elf

Journal:

Current Opinion in Biotechnology

Year:

2011

Language:

english

File:

PDF, 426 KB

english, 2011

11

Effects of macromolecular crowding and DNA looping on gene regulation kinetics

Li, Gene-Wei, Berg, Otto G., Elf, Johan

Journal:

Year:

2009

Language:

english

File:

PDF, 6.75 MB

english, 2009

12

Ribosome bypassing at serine codons as a test of the model of selective transfer RNA charging

Lindsley, Dale, Bonthuis, Paul, Gallant, Jonathan, Tofoleanu, Teodora, Elf, Johan, Ehrenberg, Måns

Journal:

Year:

2005

Language:

english

File:

PDF, 106 KB

english, 2005

13

Selective charging of tRNA isoacceptors induced by amino-acid starvation

Dittmar, Kimberly A, Sørensen, Michael A, Elf, Johan, Ehrenberg, Måns, Pan, Tao

Journal:

Year:

2005

Language:

english

File:

PDF, 177 KB

english, 2005

14

Positive allosteric feedback regulation of the stringent response enzyme RelA by its product

Shyp, Viktoriya, Tankov, Stoyan, Ermakov, Andrey, Kudrin, Pavel, English, Brian P, Ehrenberg, Måns, Tenson, Tanel, Elf, Johan, Hauryliuk, Vasili

Journal:

Year:

2012

Language:

english

File:

PDF, 507 KB

english, 2012

15

Single molecule approaches to transcription factor kinetics in living cells

Gene-Wei Li, Johan Elf

Journal:

Year:

2009

Language:

english

File:

PDF, 272 KB

english, 2009

16

Systems Biology: Nobel Symposium 146

Måns Ehrenberg, Johan Elf, Stefan Hohmann

Journal:

Year:

2009

Language:

english

File:

PDF, 151 KB

english, 2009

17

Comparison of repressor and transcriptional attenuator systems for control of amino acid biosynthetic operons

Johan Elf, Otto G. Berg, Måns Ehrenberg

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 279 KB

english, 2001

18

Over Expression of a tRNALeu Isoacceptor Changes Charging Pattern of Leucine tRNAs and Reveals New Codon Reading

Michael A. Sørensen, Johan Elf, Elli Bouakaz, Tanel Tenson, Suparna Sanyal, Glenn R. Björk, Måns Ehrenberg

Journal:

Journal of Molecular Biology

Year:

2005

Language:

english

File:

PDF, 378 KB

english, 2005

19

A Cost-effectiveness Analysis of Diagnostic Algorithms of Deep Vein Thrombosis at the Emergency Department

Jenny M. Norlin, Johan L. Elf, Peter J. Svensson, Katarina Steen Carlsson

Journal:

Thrombosis Research

Year:

2010

Language:

english

File:

PDF, 298 KB

english, 2010

20

The Bacterial Toxin RelE Displays Codon-Specific Cleavage of mRNAs in the Ribosomal A Site

Kim Pedersen, Andrey V. Zavialov, Michael Yu. Pavlov, Johan Elf, Kenn Gerdes, Måns Ehrenberg

Journal:

Year:

2003

Language:

english

File:

PDF, 300 KB

english, 2003

21

Near-Critical Phenomena in Intracellular Metabolite Pools

Elf, Johan, Paulsson, Johan, Berg, Otto G., Ehrenberg, Måns

Journal:

Biophysical Journal

Year:

2003

Language:

english

File:

PDF, 618 KB

english, 2003

22

Near-Critical Behavior of Aminoacyl-tRNA Pools in E. coli at Rate-Limiting Supply of Amino Acids

Elf, Johan, Ehrenberg, Måns

Journal:

Biophysical Journal

Year:

2005

Language:

english

File:

PDF, 396 KB

english, 2005

23

Extracting intracellular diffusive states and transition rates from single-molecule tracking data

Persson, Fredrik, Lindén, Martin, Unoson, Cecilia, Elf, Johan

Journal:

Year:

2013

Language:

english

File:

PDF, 824 KB

english, 2013

24

Single molecule methods with applications in living cells

Persson, Fredrik, Barkefors, Irmeli, Elf, Johan

Journal:

Current Opinion in Biotechnology

Year:

2013

Language:

english

File:

PDF, 2.28 MB

english, 2013

25

Transcription factor binding kinetics constrain noise suppression via negative feedback

Grönlund, Andreas, Lötstedt, Per, Elf, Johan

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 266 KB

english, 2013

26

Treatment of mesenteric vein thrombosis with transjugular mechanical thrombectomy and subsequent simultaneous arterial and venous thrombolysis

Wassélius, Johan, Sonesson, Björn, Elf, Johan, Ahlström, Martin, Malina, Martin, Dias, Nuno

Journal:

Journal of Vascular Surgery: Venous and Lymphatic Disorders

Year:

2014

Language:

english

File:

PDF, 660 KB

english, 2014

27

Stochastic Reaction–Diffusion Processes with Embedded Lower-Dimensional Structures

Wang, Siyang, Elf, Johan, Hellander, Stefan, Lötstedt, Per

Journal:

Bulletin of Mathematical Biology

Year:

2014

Language:

english

File:

PDF, 2.32 MB

english, 2014

28

A Bayesian Approach to Single Particle Tracking Analysis

Persson, Fredrik, Lindén, Martin, Unosson, Cecilia, Elf, Johan

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 38 KB

english, 2013

29

Probing Intracellular Kinetics at the Level of Single Molecules

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 33 KB

english, 2010

30

Direct Measurements of Transcription Factor Binding and Dissociation at Individual Chromosomal Operators

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 41 KB

english, 2014

31

Single Molecule Tracking Inside Individual Living Bacterial Cells

English, Brian P., Sanamrad, Arash, Hauryliuk, Vasili, Dekker, Nynke, Elf, Johan

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 32 KB

english, 2010

32

Direct measurement of transcription factor dissociation excludes a simple operator occupancy model for gene regulation

Hammar, Petter, Walldén, Mats, Fange, David, Persson, Fredrik, Baltekin, Özden, Ullman, Gustaf, Leroy, Prune, Elf, Johan

Journal:

Nature Genetics

Year:

2014

Language:

english

File:

PDF, 1001 KB

english, 2014

33

Lost in presumption: stochastic reactions in spatial models

Mahmutovic, Anel, Fange, David, Berg, Otto G, Elf, Johan

Journal:

Year:

2012

Language:

english

File:

PDF, 335 KB

english, 2012

34

Bistable Bacterial Growth Rate in Response to Antibiotics with Low Membrane Permeability

Elf, Johan, Nilsson, Karin, Tenson, Tanel, Ehrenberg, Måns

Journal:

Physical Review Letters

Year:

2006

Language:

english

File:

PDF, 224 KB

english, 2006

35

Delay-induced anomalous fluctuations in intracellular regulation

Grönlund, Andreas, Lötstedt, Per, Elf, Johan

Journal:

Nature Communications

Year:

2011

Language:

english

File:

PDF, 570 KB

english, 2011

36

[IEEE 2014 22nd International Conference on Pattern Recognition (ICPR) - Stockholm, Sweden (2014.8.24-2014.8.28)] 2014 22nd International Conference on Pattern Recognition - An Evaluation of the Faster STORM Method for Super-resolution Microscopy

Ishaq, Omer, Elf, Johan, Wahlby, Carolina

Year:

2014

Language:

english

File:

PDF, 885 KB

english, 2014

37

Single-molecule investigations of the stringent response machinery in living bacterial cells

Brian P. English, Vasili Hauryliuk, Arash Sanamrad, Stoyan Tankov, Nynke H. Dekker and Johan Elf

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 515 KB

english, 2011

38

Uitsluiten van DVT met een klinische beslisregel

Geersing, Geert-Jan, Zuithoff, Peter, Kearon, Clive, Anderson, David, ten Cate-Hoek, Arina, Elf, Johan, Bates, Shannon, Hoes, Arno, Kraaijenhagen, Roderick, Oudega, Ruud, Schutgens, Roger, Stevens, Sc

Journal:

Huisarts en wetenschap

Year:

2014

Language:

dutch

File:

PDF, 1.40 MB

dutch, 2014

39

Single molecule tracking fluorescence microscopy in mitochondria reveals highly dynamic but confined movement of Tom40

Kuzmenko, Anton, Tankov, Stoyan, English, Brian P., Tarassov, Ivan, Tenson, Tanel, Kamenski, Piotr, Elf, Johan, Hauryliuk, Vasili

Journal:

Scientific Reports

Year:

2011

Language:

english

File:

PDF, 908 KB

english, 2011

40

Segmentation and Track-analysis in Time-lapse Imaging of Bacteria

Sadanandan, Sajith, Baltekin, Ozden, Magnusson, Klas, Boucharin, Alexis, Ranefall, Petter, Jalden, Joakim, Elf, Johan, Wahlby, Carolina

Journal:

IEEE Journal of Selected Topics in Signal Processing

Year:

2015

Language:

english

File:

PDF, 9.62 MB

english, 2015

41

In Vivo Measurements of Protein Synthesis Kinetics using Single-Molecule Tracking of E.Coli tRNAS

Volkov, Ivan, Aguirre, Javier, Lindén, Martin, Elf, Johan, Johansson, Magnus

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 39 KB

english, 2016

42

Simulated single molecule microscopy with SMeagol

Lindén, Martin, Ćurić, Vladimir, Boucharin, Alexis, Fange, David, Elf, Johan

Journal:

Year:

2016

Language:

english

File:

PDF, 432 KB

english, 2016

43

Staying Clear of the Dragons

Journal:

Year:

2016

Language:

english

File:

PDF, 613 KB

english, 2016

44

Single Molecule Tracking in Living Cells - Multistep Reactions, Simulated Microscopy and New Analysis Methods

Lindén, Martin, Elf, Johan

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 39 KB

english, 2015

45

SPIE Proceedings [SPIE SPIE's First International Symposium on Fluctuations and Noise - Santa Fe, NM (Sunday 1 June 2003)] Fluctuations and Noise in Biological, Biophysical, and Biomedical Systems - Mesoscopic reaction-diffusion in intracellular signaling

Elf, Johan, Doncic, Andreas, Ehrenberg, Mans, Bezrukov, Sergey M., Frauenfelder, Hans, Moss, Frank

Year:

2003

Language:

english

File:

PDF, 431 KB

english, 2003

46

Oufti: an integrated software package for high-accuracy, high-throughput quantitative microscopy analysis

Paintdakhi, Ahmad, Parry, Bradley, Campos, Manuel, Irnov, Irnov, Elf, Johan, Surovtsev, Ivan, Jacobs-Wagner, Christine

Journal:

Molecular Microbiology

Year:

2016

Language:

english

File:

PDF, 3.35 MB

english, 2016

47

The helical structure of DNA facilitates binding

Berg, Otto G, Mahmutovic, Anel, Marklund, Emil, Elf, Johan

Journal:

Journal of Physics A Mathematical and Theoretical

Year:

2016

Language:

english

File:

PDF, 1.68 MB

english, 2016

48

Arming the Neighborhood

Koskiniemi, Sanna, Elf, Johan

Journal:

Developmental Cell

Year:

2016

Language:

english

File:

PDF, 296 KB

english, 2016

49

Application of noncanonical amino acids for protein labeling in a genomically recoded Escherichia coli

Kipper, Kalle, Lundius, Ebba Gregorsson, Curic, Vladimir, Nikic, Ivana, Lemke, Edward A., Wiessler, Manfred, Elf, Johan

Journal:

ACS Synthetic Biology

Year:

2016

Language:

english

File:

PDF, 2.78 MB

english, 2016

50

Hypothesis: Homologous Recombination Depends on Parallel Search

Journal:

Year:

2016

Language:

english

File:

PDF, 1.08 MB

english, 2016